Fthl17c Gene Detail

Summary

• Symbol
  Fthl17c
• Name
  ferritin, heavy polypeptide-like 17, member C
• Synonyms
  EG434727, Gm14511

• Feature Type
  protein coding gene
• IDs
  MGI:3705221
  NCBI Gene: 434727
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:8841957-8842798 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 4.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  33 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705221	protein coding gene	ChrX:8841949-8842798 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0035551	protein coding gene	ChrX:3716247-3717086 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0035460	protein coding gene	ChrX:3804352-3806639 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0036051	protein coding gene	ChrX:3833104-3833944 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0035359	protein coding gene	ChrX:3678631-3679372 (-)
FVB/NJ	MGP_FVBNJ_G0035308	protein coding gene	ChrX:3632395-3633235 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0035350	protein coding gene	ChrX:4032461-4033301 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0034667	protein coding gene	ChrX:3742683-3743140 (+)

Homology

• Human Ortholog
  FTH1P19, ferritin heavy chain 1 pseudogene 19

• Vertebrate Orthologs
  5

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  FTH1P19, ferritin heavy chain 1 pseudogene 19
  
• Synonyms
  FTHL19
• Links
  HGNC:33525

  NCBI Gene ID: 389844

  UniProt: P0C7X4

  
  
• Chr Location
  Xp21.1; chrX:37491957-37492720 (+)  GRCh38

---

• Human Ortholog
  FTHL17, ferritin heavy chain like 17
  
• Synonyms
  CT38
• Links
  HGNC:3987

  NCBI Gene ID: 53940

  neXtProt AC: NX_Q9BXU8

  UniProt: Q9BXU8

  
  
• Chr Location
  Xp21.2; chrX:31071233-31072041 (-)  GRCh38

---

• MGI Vertebrate Homology
  Fthl17c stringent orthology
  2 human;1 mouse;1 rat;2 zebrafish
  
• HCOP
  vertebrate homology predictions: FTH1P19, FTHL17
• Gene Tree
  Fthl17c
  

Gene Ontology
(GO)
Classifications

• All GO Annotations
  3
• GO References
  1

Expression

• Assay Results
  708
• Tissues
  1
• cDNA Data
  1
• Literature Summary
  1

Images

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS52994.1

• Ensembl
  ENSMUSG00000060685 (Evidence)
• NCBI Gene
  434727

Representative Sequences			Length	Strain/Species
genomic	434727	NCBI Gene Model | MGI Sequence Detail	842	C57BL/6J
transcript	NM_001085525	RefSeq | MGI Sequence Detail	842	C57BL/6
polypeptide	NP_001078994	RefSeq | MGI Sequence Detail	176	C57BL/6

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR001519 Ferritin
  IPR014034 Ferritin, conserved site
  IPR008331 Ferritin/DPS protein domain
  IPR012347 Ferritin-like
  IPR009040 Ferritin-like diiron domain
  IPR009078 Ferritin-like superfamily

Molecular
Reagents

• All nucleic 2

  cDNA 1

  Primer pair 1

Other
Accession IDs

MGI:3704135

References

• Summaries
  All 11

  Developmental Gene Expression 1

  Gene Ontology 1
• Earliest
  J:173437 Kobayashi S, et al., The X-linked imprinted gene family Fthl17 shows predominantly female expression following the two-cell stage in mouse embryos. Nucleic Acids Res. 2010 Jun 1;38(11):3672-81