Gm15217 Gene Detail

Summary

• Symbol
  Gm15217
• Name
  predicted gene 15217

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3705233
  NCBI Gene: 100041724
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr14:46616981-46621065 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 23.95 cM

Strain
Comparison

• SNPs within 2kb
  170 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705233	protein coding gene	Chr14:46616871-46621065 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0021211	protein coding gene	Chr14:40045702-40049900 (+)
A/J	MGP_AJ_G0021158	protein coding gene	Chr14:38858131-38862329 (+)
AKR/J	MGP_AKRJ_G0021136	protein coding gene	Chr14:40367682-40371876 (+)
BALB/cJ	MGP_BALBcJ_G0021162	protein coding gene	Chr14:38912542-38916740 (+)
C3H/HeJ	MGP_C3HHeJ_G0020945	protein coding gene	Chr14:40156624-40160822 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0021596	protein coding gene	Chr14:41787242-41791436 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019155	protein coding gene	Chr14:38237603-38241879 (+)
CAST/EiJ	MGP_CASTEiJ_G0020470	protein coding gene	Chr14:37276833-37281087 (+)
CBA/J	MGP_CBAJ_G0020911	protein coding gene	Chr14:43110146-43114344 (+)
DBA/2J	MGP_DBA2J_G0021034	protein coding gene	Chr14:38764451-38768649 (+)
FVB/NJ	MGP_FVBNJ_G0021019	protein coding gene	Chr14:38504243-38508441 (+)
LP/J	MGP_LPJ_G0021104	protein coding gene	Chr14:40330398-40334592 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0021044	protein coding gene	Chr14:42509922-42514120 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0021629	protein coding gene	Chr14:39919305-39923512 (+)
PWK/PhJ	MGP_PWKPhJ_G0020219	protein coding gene	Chr14:35627694-35631888 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0020043	protein coding gene	Chr14:36064299-36068511 (+)
WSB/EiJ	MGP_WSBEiJ_G0020526	protein coding gene	Chr14:40018563-40022755 (+)

Homology

• Gene Tree
  Gm15217
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15217
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  7 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000079261 (Evidence)
• NCBI Gene
  100041724

Representative Sequences			Length	Strain/Species
genomic	100041724	NCBI Gene Model | MGI Sequence Detail	4085	C57BL/6J
transcript	NR_037981	RefSeq | MGI Sequence Detail	676	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm15217:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr125228	Chr14:46616890-46616893 (+)	-89 bp
Tssr125229	Chr14:46616904-46616923 (+)	-67 bp