About   Help   FAQ
Krtap4-20 Gene Detail
Summary
  • Symbol
    Krtap4-20
  • Name
    keratin associated protein 4-20
  • Synonyms
    Gm11554
  • Feature Type
    protein coding gene
  • IDs
    MGI:3705237
    NCBI Gene: 670482
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:99694496-99695272 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 63.15 cM
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705237
 protein coding gene Chr11:99694383-99695272 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019117
 protein coding gene Chr11:102496952-102497856 (-)
A/J MGP_AJ_G0019089
 protein coding gene Chr11:98173594-98174483 (-)
AKR/J MGP_AKRJ_G0019058
 protein coding gene Chr11:101231415-101232304 (-)
BALB/cJ MGP_BALBcJ_G0019061
 protein coding gene Chr11:98733832-98734736 (-)
C3H/HeJ MGP_C3HHeJ_G0018873
 protein coding gene Chr11:101398451-101413996 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019512
 protein coding gene Chr11:105653182-105653650 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0018952
 protein coding gene Chr11:97746124-97754971 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0019025
 protein coding gene Chr11:103047277-103049421 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018970
 protein coding gene Chr11:109712361-109715834 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    KRTAP4-3, keratin associated protein 4-3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP4-3, keratin associated protein 4-3
  • Synonyms
    KAP4.3
  • Links
    NCBI Gene ID: 85290
    neXtProt AC: NX_Q9BYR4
    UniProt: Q9BYR4

  • Chr Location
    17q21.2; chr17:41167231-41168221 (-)  GRCh38
  • Human Ortholog
    KRTAP4-9, keratin associated protein 4-9
  • Synonyms
    KAP4.9
  • Links
    NCBI Gene ID: 100132386
    neXtProt AC: NX_Q9BYQ8
    UniProt: Q9BYQ8

  • Chr Location
    17q21.2; chr17:41105389-41106488 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 670482 NCBI Gene Model | MGI Sequence Detail 777 C57BL/6J ±  kb
transcript NM_001099313 RefSeq | MGI Sequence Detail 777 Not Specified  
polypeptide NP_001092783 RefSeq | MGI Sequence Detail 190 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR002494 Keratin-associated protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:7580861
References
more
  • Summaries
    All 17
    Phenotypes 7
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:357457 Kumar V, et al., Keratin-dependent thymic stromal lymphopoietin expression suggests a link between skin blistering and atopic disease. J Allergy Clin Immunol. 2016;138(5):1461-1464
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory