Gm15221 Gene Detail

Summary

• Symbol
  Gm15221
• Name
  predicted gene 15221

• Feature Type
  lncRNA gene
• IDs
  MGI:3705247
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:46674312-46691992 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 24.00 cM

Strain
Comparison

• SNPs within 2kb
  526 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705247	lncRNA gene	Chr14:46674312-46691992 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005538	lincRNA gene	Chr14:40105442-40124615 (+)
A/J	MGP_AJ_G0005524	lincRNA gene	Chr14:38915180-38932970 (+)
AKR/J	MGP_AKRJ_G0005503	lincRNA gene	Chr14:40431081-40450637 (+)
BALB/cJ	MGP_BALBcJ_G0005506	lincRNA gene	Chr14:38969870-38987449 (+)
C3H/HeJ	MGP_C3HHeJ_G0005453	lincRNA gene	Chr14:40218232-40236314 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005662	lincRNA gene	Chr14:41852161-41871048 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005031	lincRNA gene	Chr14:38296046-38314287 (+)
CAST/EiJ	MGP_CASTEiJ_G0005395	lincRNA gene	Chr14:37338664-37356295 (+)
CBA/J	MGP_CBAJ_G0005442	lincRNA gene	Chr14:43170775-43190921 (+)
DBA/2J	MGP_DBA2J_G0005458	lincRNA gene	Chr14:38821743-38840770 (+)
FVB/NJ	MGP_FVBNJ_G0005484	lincRNA gene	Chr14:38561335-38578827 (+)
LP/J	MGP_LPJ_G0005542	lincRNA gene	Chr14:40392249-40411080 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005468	lincRNA gene	Chr14:42569191-42587260 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005661	lincRNA gene	Chr14:39977515-39995066 (+)
PWK/PhJ	MGP_PWKPhJ_G0005346	lincRNA gene	Chr14:35687322-35705732 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005264	lincRNA gene	Chr14:36125089-36142749 (+)
WSB/EiJ	MGP_WSBEiJ_G0005445	lincRNA gene	Chr14:40080807-40098862 (+)

Homology

• Gene Tree
  Gm15221
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15221
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086168 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086168	Ensembl Gene Model | MGI Sequence Detail	17681	C57BL/6J
transcript	ENSMUST00000144439	Ensembl | MGI Sequence Detail	414	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;