Gm15486 Gene Detail

Summary

• Symbol
  Gm15486
• Name
  predicted gene 15486

• Feature Type
  lncRNA gene
• IDs
  MGI:3705263
  NCBI Gene: 102632813
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:157325572-157339293 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 68.00 cM

Strain
Comparison

• SNPs within 2kb
  440 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705263	lncRNA gene	Chr1:157325501-157339293 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002769	antisense lncRNA gene	Chr1:162545499-162561487 (-)
A/J	MGP_AJ_G0002745	antisense lncRNA gene	Chr1:155978286-155992733 (-)
AKR/J	MGP_AKRJ_G0002726	antisense lncRNA gene	Chr1:160744254-160759489 (-)
BALB/cJ	MGP_BALBcJ_G0002732	antisense lncRNA gene	Chr1:156478221-156492300 (-)
C3H/HeJ	MGP_C3HHeJ_G0002690	antisense lncRNA gene	Chr1:160887582-160906058 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002875	antisense lncRNA gene	Chr1:168101386-168118116 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002422	antisense lncRNA gene	Chr1:148159519-148173133 (-)
CAST/EiJ	MGP_CASTEiJ_G0002663	antisense lncRNA gene	Chr1:160427419-160442253 (-)
CBA/J	MGP_CBAJ_G0002686	antisense lncRNA gene	Chr1:174058760-174072551 (-)
DBA/2J	MGP_DBA2J_G0002692	antisense lncRNA gene	Chr1:154925476-154939037 (-)
FVB/NJ	MGP_FVBNJ_G0002712	antisense lncRNA gene	Chr1:153383145-153396932 (-)
LP/J	MGP_LPJ_G0002770	antisense lncRNA gene	Chr1:163658406-163673521 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002702	antisense lncRNA gene	Chr1:181586308-181603927 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002879	antisense lncRNA gene	Chr1:160571445-160587077 (-)
PWK/PhJ	MGP_PWKPhJ_G0002620	antisense lncRNA gene	Chr1:154028697-154042797 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002571	antisense lncRNA gene	Chr1:159320020-159338125 (-)
WSB/EiJ	MGP_WSBEiJ_G0002692	antisense lncRNA gene	Chr1:160682881-160696456 (-)

Homology

• Gene Tree
  Gm15486
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm15486
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000087093 (Evidence)
• NCBI Gene
  102632813

Representative Sequences			Length	Strain/Species
genomic	102632813	NCBI Gene Model | MGI Sequence Detail	13722	C57BL/6J
transcript	NR_151610	RefSeq | MGI Sequence Detail	535	Not Specified

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;