Gm15048 Pseudogene Detail

Summary

• Symbol
  Gm15048
• Name
  predicted gene 15048

• Feature Type
  pseudogene
• IDs
  MGI:3705330
  NCBI Gene: 100417871
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:142931490-142932131 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 65.23 cM

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705330	pseudogene	ChrX:142930306-142932169 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014891	pseudogene	ChrX:141698204-141700067 (+)
A/J	MGP_AJ_G0014883	pseudogene	ChrX:141008327-141010773 (+)
AKR/J	MGP_AKRJ_G0014825	pseudogene	ChrX:145589182-145591045 (+)
BALB/cJ	MGP_BALBcJ_G0014840	pseudogene	ChrX:139263328-139266339 (+)
C3H/HeJ	MGP_C3HHeJ_G0014675	pseudogene	ChrX:141778385-141784174 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015324	pseudogene	ChrX:145702307-145704170 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012967	pseudogene	ChrX:132604034-132605900 (+)
CAST/EiJ	MGP_CASTEiJ_G0014289	pseudogene	ChrX:122442554-122444913 (+)
CBA/J	MGP_CBAJ_G0014665	pseudogene	ChrX:150204618-150206913 (+)
DBA/2J	MGP_DBA2J_G0014747	pseudogene	ChrX:140109283-140111909 (+)
FVB/NJ	MGP_FVBNJ_G0014731	pseudogene	ChrX:139318392-139320265 (+)
LP/J	MGP_LPJ_G0014845	pseudogene	ChrX:142627174-142630880 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014775	pseudogene	ChrX:157948162-157951523 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015309	pseudogene	ChrX:140974633-140978161 (+)
PWK/PhJ	MGP_PWKPhJ_G0014088	pseudogene	ChrX:119247488-119249342 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013873	pseudogene	ChrX:122979954-122981816 (+)
WSB/EiJ	MGP_WSBEiJ_G0014369	pseudogene	ChrX:139350652-139352367 (+)

Homology

• Gene Tree
  Gm15048
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082060 (Evidence)
• NCBI Gene
  100417871

Representative Sequences			Length	Strain/Species
genomic	100417871	NCBI Gene Model | MGI Sequence Detail	642	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;