Gm15002 Pseudogene Detail

Summary

• Symbol
  Gm15002
• Name
  predicted gene 15002

• Feature Type
  pseudogene
• IDs
  MGI:3705342
  NCBI Gene: 675062
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:138157673-138158360 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 61.31 cM

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705342	pseudogene	ChrX:138157673-138158360 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014858	pseudogene	ChrX:136733353-136733993 (-)
A/J	MGP_AJ_G0014852	pseudogene	ChrX:136125879-136126518 (-)
AKR/J	MGP_AKRJ_G0014792	pseudogene	ChrX:140524758-140526356 (-)
BALB/cJ	MGP_BALBcJ_G0014806	pseudogene	ChrX:134477347-134477951 (-)
C3H/HeJ	MGP_C3HHeJ_G0014642	pseudogene	ChrX:136759654-136760346 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015295	pseudogene	ChrX:140783531-140784203 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012939	pseudogene	ChrX:127913935-127914612 (-)
CAST/EiJ	MGP_CASTEiJ_G0014258	pseudogene	ChrX:117578027-117579164 (-)
CBA/J	MGP_CBAJ_G0014631	pseudogene	ChrX:145053757-145055232 (-)
DBA/2J	MGP_DBA2J_G0014715	pseudogene	ChrX:135324984-135326104 (-)
FVB/NJ	MGP_FVBNJ_G0014698	pseudogene	ChrX:134554149-134555101 (-)
LP/J	MGP_LPJ_G0014815	pseudogene	ChrX:137707237-137718194 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014743	pseudogene	ChrX:152581836-152583063 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015276	pseudogene	ChrX:136071043-136073116 (-)
PWK/PhJ	MGP_PWKPhJ_G0014057	pseudogene	ChrX:114517623-114518371 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013848	pseudogene	ChrX:118110018-118110701 (-)
WSB/EiJ	MGP_WSBEiJ_G0014337	pseudogene	ChrX:134374677-134375286 (-)

Homology

• Gene Tree
  Gm15002
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081869 (Evidence)
• NCBI Gene
  675062

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081869	Ensembl Gene Model | MGI Sequence Detail	688	C57BL/6J
transcript	ENSMUST00000118406	Ensembl | MGI Sequence Detail	452	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;