Gm15180 Pseudogene Detail

Summary

• Symbol
  Gm15180
• Name
  predicted gene 15180

• Feature Type
  pseudogene
• IDs
  MGI:3705360
  NCBI Gene: 102638885
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:75544727-75545218 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 39.16 cM

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705360	pseudogene	Chr1:75544712-75545311 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010207	pseudogene	Chr1:76155680-76156171 (+)
A/J	MGP_AJ_G0010199	pseudogene	Chr1:73498151-73498642 (+)
AKR/J	MGP_AKRJ_G0010173	pseudogene	Chr1:75539473-75539964 (+)
BALB/cJ	MGP_BALBcJ_G0010177	pseudogene	Chr1:73561069-73561560 (+)
C3H/HeJ	MGP_C3HHeJ_G0010114	pseudogene	Chr1:75863860-75864351 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010432	pseudogene	Chr1:79109607-79110098 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009168	pseudogene	Chr1:69054301-69054797 (+)
CAST/EiJ	MGP_CASTEiJ_G0009942	pseudogene	Chr1:75209346-75209836 (+)
CBA/J	MGP_CBAJ_G0010083	pseudogene	Chr1:81688464-81688955 (+)
DBA/2J	MGP_DBA2J_G0010111	pseudogene	Chr1:72814016-72814507 (+)
FVB/NJ	MGP_FVBNJ_G0010131	pseudogene	Chr1:72030982-72031473 (+)
LP/J	MGP_LPJ_G0010195	pseudogene	Chr1:77279571-77280062 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010092	pseudogene	Chr1:85022049-85022540 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010409	pseudogene	Chr1:75601917-75602408 (+)
PWK/PhJ	MGP_PWKPhJ_G0009845	pseudogene	Chr1:72292717-72293208 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009661	pseudogene	Chr1:74957471-74957946 (+)
WSB/EiJ	MGP_WSBEiJ_G0010007	pseudogene	Chr1:75410593-75411084 (+)

Homology

• Gene Tree
  Gm15180
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15180
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000083244 (Evidence)
• NCBI Gene
  102638885

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083244	Ensembl Gene Model | MGI Sequence Detail	492	C57BL/6J
transcript	ENSMUST00000117745	Ensembl | MGI Sequence Detail	492	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45