Gm15033 Pseudogene Detail

Summary

• Symbol
  Gm15033
• Name
  predicted gene 15033

• Feature Type
  pseudogene
• IDs
  MGI:3705364
  NCBI Gene: 100040344
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:49033512-49034184 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 26.11 cM

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705364	pseudogene	ChrX:49033430-49034387 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014415	pseudogene	ChrX:45102024-45102696 (+)
A/J	MGP_AJ_G0014421	pseudogene	ChrX:44953277-44953949 (+)
AKR/J	MGP_AKRJ_G0014348	pseudogene	ChrX:46200405-46201077 (+)
BALB/cJ	MGP_BALBcJ_G0014374	pseudogene	ChrX:44562782-44563454 (+)
C3H/HeJ	MGP_C3HHeJ_G0014207	pseudogene	ChrX:45370517-45371189 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014832	pseudogene	ChrX:46180628-46181300 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013848	pseudogene	ChrX:32900819-32901503 (+)
CBA/J	MGP_CBAJ_G0014191	pseudogene	ChrX:47457075-47457747 (+)
DBA/2J	MGP_DBA2J_G0014271	pseudogene	ChrX:44771543-44772215 (+)
FVB/NJ	MGP_FVBNJ_G0014270	pseudogene	ChrX:44491983-44492655 (+)
LP/J	MGP_LPJ_G0014369	pseudogene	ChrX:45478041-45478713 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014304	pseudogene	ChrX:48966899-48967571 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014811	pseudogene	ChrX:45001339-45002011 (+)
PWK/PhJ	MGP_PWKPhJ_G0013661	pseudogene	ChrX:32365246-32365921 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0013915	pseudogene	ChrX:44592596-44593276 (+)

Homology

• Gene Tree
  Gm15033
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000083399 (Evidence)
• NCBI Gene
  100040344

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083399	Ensembl Gene Model | MGI Sequence Detail	673	C57BL/6J
transcript	ENSMUST00000118188	Ensembl | MGI Sequence Detail	673	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;