Gm14972 Pseudogene Detail

Summary

• Symbol
  Gm14972
• Name
  predicted gene 14972

• Feature Type
  pseudogene
• IDs
  MGI:3705379
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:125875346-125875709 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 49.81 cM

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705379	pseudogene	ChrX:125875346-125875709 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014803	pseudogene	ChrX:123960947-123961310 (-)
A/J	MGP_AJ_G0014800	pseudogene	ChrX:123419760-123420123 (-)
AKR/J	MGP_AKRJ_G0014736	pseudogene	ChrX:127419748-127420111 (-)
BALB/cJ	MGP_BALBcJ_G0014753	pseudogene	ChrX:121943198-121943561 (-)
C3H/HeJ	MGP_C3HHeJ_G0014584	pseudogene	ChrX:124103931-124104294 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015238	pseudogene	ChrX:127585227-127585590 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012892	pseudogene	ChrX:116230605-116230971 (-)
CAST/EiJ	MGP_CASTEiJ_G0014203	pseudogene	ChrX:105172004-105172367 (-)
CBA/J	MGP_CBAJ_G0014577	pseudogene	ChrX:131427975-131428338 (-)
DBA/2J	MGP_DBA2J_G0014663	pseudogene	ChrX:122852285-122852648 (-)
FVB/NJ	MGP_FVBNJ_G0014640	pseudogene	ChrX:122119902-122120265 (-)
LP/J	MGP_LPJ_G0014757	pseudogene	ChrX:124816323-124816686 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014689	pseudogene	ChrX:138002082-138002445 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015212	pseudogene	ChrX:123420012-123420375 (-)
PWK/PhJ	MGP_PWKPhJ_G0014005	pseudogene	ChrX:102217632-102217995 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010829	pseudogene	Chr19:15500363-15500728 (+)
WSB/EiJ	MGP_WSBEiJ_G0014284	pseudogene	ChrX:121971681-121972044 (-)

Homology

• Gene Tree
  Gm14972
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082690 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082690	Ensembl Gene Model | MGI Sequence Detail	364	C57BL/6J
transcript	ENSMUST00000121780	Ensembl | MGI Sequence Detail	364	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;