Gm15329 Pseudogene Detail

Summary

• Symbol
  Gm15329
• Name
  predicted gene 15329

• Feature Type
  pseudogene
• IDs
  MGI:3705409
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:34740724-34740878 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 18.11 cM

Strain
Comparison

• SNPs within 2kb
  24 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705409	pseudogene	Chr17:34740724-34740878 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040155	pseudogene	Chr17:34583075-34583229 (-)
A/J	MGP_AJ_G0040148	pseudogene	Chr17:33417977-33418131 (-)
AKR/J	MGP_AKRJ_G0040071	pseudogene	Chr17:33802803-33802957 (-)
BALB/cJ	MGP_BALBcJ_G0040134	pseudogene	Chr17:33557332-33557486 (-)
C3H/HeJ	MGP_C3HHeJ_G0039779	pseudogene	Chr17:34079061-34079215 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040724	pseudogene	Chr17:35849954-35850108 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037191	pseudogene	Chr17:31314503-31314657 (-)
CAST/EiJ	MGP_CASTEiJ_G0038870	pseudogene	Chr17:34170114-34170268 (-)
CBA/J	MGP_CBAJ_G0039745	pseudogene	Chr17:37265057-37265211 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0039904	pseudogene	Chr17:32535985-32536139 (-)
LP/J	MGP_LPJ_G0039988	pseudogene	Chr17:34864320-34864474 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039893	pseudogene	Chr17:36323194-36323348 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040822	pseudogene	Chr17:34140239-34140393 (-)
PWK/PhJ	MGP_PWKPhJ_G0038562	pseudogene	Chr17:31641166-31641772 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038265	pseudogene	Chr17:32006194-32006348 (-)
WSB/EiJ	MGP_WSBEiJ_G0039094	pseudogene	Chr17:34136152-34136306 (-)

Homology

• Gene Tree
  Gm15329
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000083441 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083441	Ensembl Gene Model | MGI Sequence Detail	155	C57BL/6J
transcript	ENSMUST00000121408	Ensembl | MGI Sequence Detail	155	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;