Gm15078 Pseudogene Detail

Summary

• Symbol
  Gm15078
• Name
  predicted gene 15078

• Feature Type
  pseudogene
• IDs
  MGI:3705413
  NCBI Gene: 100415974
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:140139174-140139955 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 62.02 cM

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705413	pseudogene	ChrX:140139108-140140103 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014869	pseudogene	ChrX:138833080-138833861 (+)
A/J	MGP_AJ_G0014862	pseudogene	ChrX:138205720-138206502 (+)
AKR/J	MGP_AKRJ_G0014804	pseudogene	ChrX:142644109-142644890 (+)
BALB/cJ	MGP_BALBcJ_G0014818	pseudogene	ChrX:136494346-136495128 (+)
C3H/HeJ	MGP_C3HHeJ_G0014654	pseudogene	ChrX:138954961-138955742 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015306	pseudogene	ChrX:142851363-142852144 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012948	pseudogene	ChrX:129871979-129872780 (+)
CAST/EiJ	MGP_CASTEiJ_G0014268	pseudogene	ChrX:119668570-119669352 (+)
CBA/J	MGP_CBAJ_G0014643	pseudogene	ChrX:147272618-147273399 (+)
DBA/2J	MGP_DBA2J_G0014726	pseudogene	ChrX:137315287-137316068 (+)
FVB/NJ	MGP_FVBNJ_G0014709	pseudogene	ChrX:136542427-136543208 (+)
LP/J	MGP_LPJ_G0014825	pseudogene	ChrX:139762629-139763410 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014753	pseudogene	ChrX:154813516-154814297 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015287	pseudogene	ChrX:138135914-138136695 (+)
PWK/PhJ	MGP_PWKPhJ_G0014069	pseudogene	ChrX:116534547-116535329 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013857	pseudogene	ChrX:120171035-120171824 (+)
WSB/EiJ	MGP_WSBEiJ_G0014348	pseudogene	ChrX:136569607-136570388 (+)

Homology

• Gene Tree
  Gm15078
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083710 (Evidence)
• NCBI Gene
  100415974

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083710	Ensembl Gene Model | MGI Sequence Detail	782	C57BL/6J
transcript	ENSMUST00000118371	Ensembl | MGI Sequence Detail	782	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;