Gm15198 Pseudogene Detail

Summary

• Symbol
  Gm15198
• Name
  predicted gene 15198

• Feature Type
  pseudogene
• IDs
  MGI:3705463
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:42311885-42312061 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 22.89 cM

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705463	pseudogene	Chr10:42311885-42312061 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010511	pseudogene	Chr10:41142044-41142220 (+)
A/J	MGP_AJ_G0010505	pseudogene	Chr10:39986679-39986855 (+)
AKR/J	MGP_AKRJ_G0010468	pseudogene	Chr10:40593784-40593960 (+)
BALB/cJ	MGP_BALBcJ_G0010478	pseudogene	Chr10:40043362-40043538 (+)
C3H/HeJ	MGP_C3HHeJ_G0010406	pseudogene	Chr10:40934854-40935030 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010749	pseudogene	Chr10:42385400-42385576 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009418	pseudogene	Chr10:37850751-37850927 (+)
CAST/EiJ	MGP_CASTEiJ_G0010223	pseudogene	Chr10:41122298-41122474 (+)
CBA/J	MGP_CBAJ_G0010372	pseudogene	Chr10:44327768-44327944 (+)
DBA/2J	MGP_DBA2J_G0010405	pseudogene	Chr10:39472445-39472621 (+)
FVB/NJ	MGP_FVBNJ_G0010424	pseudogene	Chr10:38969638-38969814 (+)
LP/J	MGP_LPJ_G0010494	pseudogene	Chr10:41133004-41133180 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010391	pseudogene	Chr10:45085425-45085601 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010717	pseudogene	Chr10:40573440-40573616 (+)
PWK/PhJ	MGP_PWKPhJ_G0010125	pseudogene	Chr10:39345815-39345991 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009939	pseudogene	Chr10:40389626-40389798 (+)
WSB/EiJ	MGP_WSBEiJ_G0010292	pseudogene	Chr10:40873006-40873182 (+)

Homology

• Gene Tree
  Gm15198
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15198
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000083429 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083429	Ensembl Gene Model | MGI Sequence Detail	177	C57BL/6J
transcript	ENSMUST00000117283	Ensembl | MGI Sequence Detail	177	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87