Gm14780 Pseudogene Detail

Summary

• Symbol
  Gm14780
• Name
  predicted gene 14780

• Feature Type
  pseudogene
• IDs
  MGI:3705499
  NCBI Gene: 100302595
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:92571179-92573915 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 41.20 cM

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705499	pseudogene	ChrX:92571179-92574004 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014610	pseudogene	ChrX:89894388-89897124 (+)
A/J	MGP_AJ_G0014619	pseudogene	ChrX:89997878-90000614 (+)
AKR/J	MGP_AKRJ_G0014543	pseudogene	ChrX:92371765-92374501 (+)
BALB/cJ	MGP_BALBcJ_G0014569	pseudogene	ChrX:88696436-88699172 (+)
C3H/HeJ	MGP_C3HHeJ_G0014404	pseudogene	ChrX:90261937-90264673 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015050	pseudogene	ChrX:92638359-92641095 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014030	pseudogene	ChrX:74937766-74939978 (+)
CBA/J	MGP_CBAJ_G0014391	pseudogene	ChrX:95333491-95336227 (+)
DBA/2J	MGP_DBA2J_G0014472	pseudogene	ChrX:89251457-89254193 (+)
FVB/NJ	MGP_FVBNJ_G0014459	pseudogene	ChrX:88636213-88638949 (+)
LP/J	MGP_LPJ_G0014570	pseudogene	ChrX:90686187-90688923 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014499	pseudogene	ChrX:99615430-99618166 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015017	pseudogene	ChrX:89610739-89613475 (+)
PWK/PhJ	MGP_PWKPhJ_G0013837	pseudogene	ChrX:72734357-72737069 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013630	pseudogene	ChrX:75783152-75785906 (+)
WSB/EiJ	MGP_WSBEiJ_G0014107	pseudogene	ChrX:88406963-88409699 (+)

Homology

• Gene Tree
  Gm14780
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083207 (Evidence)
• NCBI Gene
  100302595

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083207	Ensembl Gene Model | MGI Sequence Detail	2737	C57BL/6J
transcript	ENSMUST00000118387	Ensembl | MGI Sequence Detail	2737	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;