Gm15177 Pseudogene Detail

Summary

• Symbol
  Gm15177
• Name
  predicted gene 15177

• Feature Type
  pseudogene
• IDs
  MGI:3705527
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:157085917-157086493 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 73.12 cM

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705527	pseudogene	ChrX:157085917-157086493 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014969	pseudogene	ChrX:156213715-156214291 (+)
A/J	MGP_AJ_G0014958	pseudogene	ChrX:155514123-155514699 (+)
AKR/J	MGP_AKRJ_G0014900	pseudogene	ChrX:160410761-160411337 (+)
BALB/cJ	MGP_BALBcJ_G0014913	pseudogene	ChrX:153586347-153586923 (+)
C3H/HeJ	MGP_C3HHeJ_G0014751	pseudogene	ChrX:156596791-156597367 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015399	pseudogene	ChrX:160835375-160835951 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013022	pseudogene	ChrX:146831271-146831845 (+)
CAST/EiJ	MGP_CASTEiJ_G0014357	pseudogene	ChrX:135681980-135682556 (+)
CBA/J	MGP_CBAJ_G0014736	pseudogene	ChrX:165418383-165418959 (+)
DBA/2J	MGP_DBA2J_G0014820	pseudogene	ChrX:154480941-154481517 (+)
FVB/NJ	MGP_FVBNJ_G0014803	pseudogene	ChrX:153590474-153591050 (+)
LP/J	MGP_LPJ_G0014921	pseudogene	ChrX:157361802-157362378 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014847	pseudogene	ChrX:174072102-174072678 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015383	pseudogene	ChrX:155746774-155747350 (+)
PWK/PhJ	MGP_PWKPhJ_G0014148	pseudogene	ChrX:132590548-132591124 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013938	pseudogene	ChrX:136093044-136093609 (+)
WSB/EiJ	MGP_WSBEiJ_G0014436	pseudogene	ChrX:153749078-153749654 (+)

Homology

• Gene Tree
  Gm15177
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084270 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084270	Ensembl Gene Model | MGI Sequence Detail	577	C57BL/6J
transcript	ENSMUST00000120491	Ensembl | MGI Sequence Detail	577	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;