Gm15061 Pseudogene Detail

Summary

• Symbol
  Gm15061
• Name
  predicted gene 15061

• Feature Type
  pseudogene
• IDs
  MGI:3705543
  NCBI Gene: 100416439
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:145047945-145048973 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 67.66 cM

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705543	pseudogene	ChrX:145047945-145048993 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014911	pseudogene	ChrX:143836605-143837650 (+)
A/J	MGP_AJ_G0014903	pseudogene	ChrX:143130892-143131937 (+)
AKR/J	MGP_AKRJ_G0014843	pseudogene	ChrX:147833666-147834711 (+)
BALB/cJ	MGP_BALBcJ_G0014860	pseudogene	ChrX:141364002-141365047 (+)
C3H/HeJ	MGP_C3HHeJ_G0014695	pseudogene	ChrX:143971711-143972756 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015344	pseudogene	ChrX:147898177-147899222 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012981	pseudogene	ChrX:134688455-134689507 (+)
CAST/EiJ	MGP_CASTEiJ_G0014309	pseudogene	ChrX:124517745-124518787 (+)
CBA/J	MGP_CBAJ_G0014685	pseudogene	ChrX:152451601-152452646 (+)
DBA/2J	MGP_DBA2J_G0014767	pseudogene	ChrX:142201301-142202346 (+)
FVB/NJ	MGP_FVBNJ_G0014749	pseudogene	ChrX:141401226-141402289 (+)
LP/J	MGP_LPJ_G0014865	pseudogene	ChrX:144744302-144745347 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0015328	pseudogene	ChrX:143103612-143104657 (+)
PWK/PhJ	MGP_PWKPhJ_G0014106	pseudogene	ChrX:121242981-121244026 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013893	pseudogene	ChrX:125054617-125055662 (+)
WSB/EiJ	MGP_WSBEiJ_G0014388	pseudogene	ChrX:141451609-141452654 (+)

Homology

• Gene Tree
  Gm15061
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000084161 (Evidence)
• NCBI Gene
  100416439

Representative Sequences			Length	Strain/Species
genomic	100416439	NCBI Gene Model | MGI Sequence Detail	1029	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;