Gm15335 Pseudogene Detail

Summary

• Symbol
  Gm15335
• Name
  predicted gene 15335

• Feature Type
  pseudogene
• IDs
  MGI:3705562
  NCBI Gene: 100042671
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:38850581-38851181 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 20.60 cM

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705562	pseudogene	Chr18:38850581-38851181 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011438	pseudogene	Chr18:37212671-37213271 (-)
A/J	MGP_AJ_G0011432	pseudogene	Chr18:35911165-35911766 (-)
AKR/J	MGP_AKRJ_G0011396	pseudogene	Chr18:36888780-36889381 (-)
BALB/cJ	MGP_BALBcJ_G0011410	pseudogene	Chr18:35982359-35982960 (-)
C3H/HeJ	MGP_C3HHeJ_G0011298	pseudogene	Chr18:36968019-36968620 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011703	pseudogene	Chr18:38529519-38530119 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010259	pseudogene	Chr18:35909807-35910411 (-)
CAST/EiJ	MGP_CASTEiJ_G0011105	pseudogene	Chr18:36922354-36922955 (-)
CBA/J	MGP_CBAJ_G0011274	pseudogene	Chr18:39666953-39667554 (-)
DBA/2J	MGP_DBA2J_G0011327	pseudogene	Chr18:35499791-35500392 (-)
FVB/NJ	MGP_FVBNJ_G0011333	pseudogene	Chr18:35219047-35219647 (-)
LP/J	MGP_LPJ_G0011398	pseudogene	Chr18:37249927-37250527 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011325	pseudogene	Chr18:40884144-40884745 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011689	pseudogene	Chr18:36777961-36778561 (-)
PWK/PhJ	MGP_PWKPhJ_G0010967	pseudogene	Chr18:35728900-35729501 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010789	pseudogene	Chr18:36987404-36988005 (-)
WSB/EiJ	MGP_WSBEiJ_G0011136	pseudogene	Chr18:36666202-36666802 (-)

Homology

• Gene Tree
  Gm15335
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083766 (Evidence)
• NCBI Gene
  100042671

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083766	Ensembl Gene Model | MGI Sequence Detail	601	C57BL/6J
transcript	ENSMUST00000122442	Ensembl | MGI Sequence Detail	411	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;