Gm15455 Pseudogene Detail

Summary

• Symbol
  Gm15455
• Name
  predicted gene 15455

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3705563
  NCBI Gene: 433287
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:33875205-33877761 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 12.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  217 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705563	pseudogene	Chr1:33874980-33877995 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012796	pseudogene	Chr4:102391271-102394050 (-)
A/J	MGP_AJ_G0010051	pseudogene	Chr1:31434493-31437049 (-)
AKR/J	MGP_AKRJ_G0010033	pseudogene	Chr1:31800863-31803415 (-)
BALB/cJ	MGP_BALBcJ_G0012761	pseudogene	Chr4:99016617-99021537 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0010287	pseudogene	Chr1:33686293-33688791 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009054	pseudogene	Chr1:28612140-28614693 (-)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0009992	pseudogene	Chr1:30311357-30315108 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0009948	pseudogene	Chr1:36895602-36898006 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013101	pseudogene	Chr4:101437707-101441359 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15455
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15455
• Incidental Mutations
  CvDC
• Find Mice (IMSR)
  9 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  2

• Ensembl
  ENSMUSG00000081402 (Evidence)
• NCBI Gene
  433287

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081402	Ensembl Gene Model | MGI Sequence Detail	2557	C57BL/6J
transcript	ENSMUST00000117459	Ensembl | MGI Sequence Detail	2557	Not Applicable
polypeptide	NP_001155288	RefSeq | MGI Sequence Detail	852	C57BL/6

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:3034501

References

• Summaries
  All 12

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;