Gm15225 Pseudogene Detail

Summary

• Symbol
  Gm15225
• Name
  predicted gene 15225

• Feature Type
  pseudogene
• IDs
  MGI:3705585
  NCBI Gene: 100417998
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:164845278-164853233 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 76.75 cM

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705585	pseudogene	ChrX:164845233-164853233 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015003	pseudogene	ChrX:164195976-164199111 (+)
A/J	MGP_AJ_G0014993	pseudogene	ChrX:163328347-163331589 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0014947	pseudogene	ChrX:161325261-161327628 (+)
C3H/HeJ	MGP_C3HHeJ_G0014786	pseudogene	ChrX:164504444-164506376 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015432	pseudogene	ChrX:168971497-168975507 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013050	pseudogene	ChrX:154218997-154220670 (+)
CAST/EiJ	MGP_CASTEiJ_G0014387	pseudogene	ChrX:143385124-143387485 (+)
CBA/J	MGP_CBAJ_G0014770	pseudogene	ChrX:173911711-173913722 (+)
DBA/2J	MGP_DBA2J_G0014854	pseudogene	ChrX:162175397-162183637 (+)
FVB/NJ	MGP_FVBNJ_G0014836	pseudogene	ChrX:161294277-161302081 (+)
LP/J	MGP_LPJ_G0014955	pseudogene	ChrX:165302677-165304608 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014882	pseudogene	ChrX:182626623-182628630 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015417	pseudogene	ChrX:163669836-163671787 (+)
PWK/PhJ	MGP_PWKPhJ_G0014180	pseudogene	ChrX:140147088-140149483 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013966	pseudogene	ChrX:143901858-143903575 (+)
WSB/EiJ	MGP_WSBEiJ_G0014469	pseudogene	ChrX:161524401-161526413 (+)

Homology

• Gene Tree
  Gm15225
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083466 (Evidence)
• NCBI Gene
  100417998

Representative Sequences			Length	Strain/Species
genomic	100417998	NCBI Gene Model | MGI Sequence Detail	7956	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;