Gm14538 Pseudogene Detail

Summary

• Symbol
  Gm14538
• Name
  predicted gene 14538

• Feature Type
  pseudogene
• IDs
  MGI:3705591
  NCBI Gene: 100417915
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:20394364-20395634 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 16.01 cM

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705591	pseudogene	ChrX:20394364-20395821 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014344	pseudogene	ChrX:15418748-15420074 (+)
A/J	MGP_AJ_G0014354	pseudogene	ChrX:15508240-15509566 (+)
AKR/J	MGP_AKRJ_G0014280	pseudogene	ChrX:16021345-16022671 (+)
BALB/cJ	MGP_BALBcJ_G0014304	pseudogene	ChrX:15261794-15263120 (+)
C3H/HeJ	MGP_C3HHeJ_G0014139	pseudogene	ChrX:15630219-15631545 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014763	pseudogene	ChrX:15819121-15820447 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012553	pseudogene	ChrX:13749512-13750833 (+)
CAST/EiJ	MGP_CASTEiJ_G0013779	pseudogene	ChrX:14931719-14933059 (+)
CBA/J	MGP_CBAJ_G0014123	pseudogene	ChrX:16548112-16549438 (+)
DBA/2J	MGP_DBA2J_G0014201	pseudogene	ChrX:15310159-15311485 (+)
FVB/NJ	MGP_FVBNJ_G0014202	pseudogene	ChrX:15211079-15212405 (+)
LP/J	MGP_LPJ_G0014295	pseudogene	ChrX:15648326-15649652 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014237	pseudogene	ChrX:16804964-16806290 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014734	pseudogene	ChrX:15335144-15336470 (+)
PWK/PhJ	MGP_PWKPhJ_G0013595	pseudogene	ChrX:14501163-14502503 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013387	pseudogene	ChrX:15310646-15311968 (+)
WSB/EiJ	MGP_WSBEiJ_G0013844	pseudogene	ChrX:15202705-15204031 (+)

Homology

• Gene Tree
  Gm14538
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081390 (Evidence)
• NCBI Gene
  100417915

Representative Sequences			Length	Strain/Species
genomic	100417915	NCBI Gene Model | MGI Sequence Detail	1271	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;