Gm15379 Pseudogene Detail

Summary

• Symbol
  Gm15379
• Name
  predicted gene 15379

• Feature Type
  pseudogene
• IDs
  MGI:3705643
  NCBI Gene: 100417820
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:74502418-74503065 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.23 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705643	pseudogene	ChrX:74502418-74503262 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014524	pseudogene	ChrX:71303111-71303758 (+)
A/J	MGP_AJ_G0014534	pseudogene	ChrX:71527153-71527800 (+)
AKR/J	MGP_AKRJ_G0014461	pseudogene	ChrX:73377231-73377878 (+)
BALB/cJ	MGP_BALBcJ_G0014487	pseudogene	ChrX:70519569-70520216 (+)
C3H/HeJ	MGP_C3HHeJ_G0014320	pseudogene	ChrX:71808561-71809208 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014957	pseudogene	ChrX:73595421-73596068 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012707	pseudogene	ChrX:71040591-71041237 (+)
CAST/EiJ	MGP_CASTEiJ_G0013952	pseudogene	ChrX:57130153-57130800 (+)
CBA/J	MGP_CBAJ_G0014305	pseudogene	ChrX:75550337-75550984 (+)
DBA/2J	MGP_DBA2J_G0014387	pseudogene	ChrX:70979350-70979997 (+)
FVB/NJ	MGP_FVBNJ_G0014377	pseudogene	ChrX:70306009-70306656 (+)
LP/J	MGP_LPJ_G0014482	pseudogene	ChrX:72104107-72104754 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014418	pseudogene	ChrX:78166923-78167570 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014929	pseudogene	ChrX:71177746-71178393 (+)
PWK/PhJ	MGP_PWKPhJ_G0013756	pseudogene	ChrX:55134877-55135524 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013558	pseudogene	ChrX:57949953-57950599 (+)
WSB/EiJ	MGP_WSBEiJ_G0014026	pseudogene	ChrX:70379226-70379873 (+)

Homology

• Gene Tree
  Gm15379
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082208 (Evidence)
• NCBI Gene
  100417820

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082208	Ensembl Gene Model | MGI Sequence Detail	648	C57BL/6J
transcript	ENSMUST00000121224	Ensembl | MGI Sequence Detail	648	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;