Gm14516 Pseudogene Detail

Summary

• Symbol
  Gm14516
• Name
  predicted gene 14516

• Feature Type
  pseudogene
• IDs
  MGI:3705695
  NCBI Gene: 100043950
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:16245635-16245886 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 11.53 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705695	pseudogene	ChrX:16245635-16245886 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014327	pseudogene	ChrX:11260131-11260382 (-)
A/J	MGP_AJ_G0014335	pseudogene	ChrX:11327162-11327413 (-)
AKR/J	MGP_AKRJ_G0014262	pseudogene	ChrX:11690250-11690501 (-)
BALB/cJ	MGP_BALBcJ_G0014285	pseudogene	ChrX:11144046-11144297 (-)
C3H/HeJ	MGP_C3HHeJ_G0014120	pseudogene	ChrX:11388694-11388945 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014744	pseudogene	ChrX:11522554-11522805 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013762	pseudogene	ChrX:10907741-10907993 (-)
CBA/J	MGP_CBAJ_G0014104	pseudogene	ChrX:12059432-12059683 (-)
DBA/2J	MGP_DBA2J_G0014182	pseudogene	ChrX:11182511-11182762 (-)
FVB/NJ	MGP_FVBNJ_G0014182	pseudogene	ChrX:11028528-11028779 (-)
LP/J	MGP_LPJ_G0014278	pseudogene	ChrX:11511672-11511923 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014220	pseudogene	ChrX:12130833-12131084 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014714	pseudogene	ChrX:11175060-11175311 (-)
PWK/PhJ	MGP_PWKPhJ_G0013578	pseudogene	ChrX:10514858-10515109 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013367	pseudogene	ChrX:11157880-11158131 (-)
WSB/EiJ	MGP_WSBEiJ_G0013827	pseudogene	ChrX:11123679-11123930 (-)

Homology

• Gene Tree
  Gm14516
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000083551 (Evidence)
• NCBI Gene
  100043950

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083551	Ensembl Gene Model | MGI Sequence Detail	252	C57BL/6J
transcript	ENSMUST00000120012	Ensembl | MGI Sequence Detail	252	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;