Gm15233 Pseudogene Detail

Summary

• Symbol
  Gm15233
• Name
  predicted gene 15233

• Feature Type
  pseudogene
• IDs
  MGI:3705707
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:167557853-167558252 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 78.76 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705707	pseudogene	ChrX:167557853-167558252 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015015	pseudogene	ChrX:166979594-166979993 (-)
A/J	MGP_AJ_G0015005	pseudogene	ChrX:166110977-166111376 (-)
AKR/J	MGP_AKRJ_G0014944	pseudogene	ChrX:171428477-171428876 (-)
BALB/cJ	MGP_BALBcJ_G0014959	pseudogene	ChrX:164073732-164074131 (-)
C3H/HeJ	MGP_C3HHeJ_G0014798	pseudogene	ChrX:167290816-167291215 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015446	pseudogene	ChrX:171824829-171825228 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013065	pseudogene	ChrX:156829248-156829653 (-)
CAST/EiJ	MGP_CASTEiJ_G0014401	pseudogene	ChrX:146147199-146147598 (-)
CBA/J	MGP_CBAJ_G0014784	pseudogene	ChrX:176815933-176816332 (-)
DBA/2J	MGP_DBA2J_G0014867	pseudogene	ChrX:164874849-164875248 (-)
FVB/NJ	MGP_FVBNJ_G0014848	pseudogene	ChrX:164016026-164016425 (-)
LP/J	MGP_LPJ_G0014968	pseudogene	ChrX:168062653-168063052 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014894	pseudogene	ChrX:185555852-185556251 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015431	pseudogene	ChrX:166459125-166459524 (-)
PWK/PhJ	MGP_PWKPhJ_G0014194	pseudogene	ChrX:142873772-142874171 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013980	pseudogene	ChrX:146730873-146731272 (-)
WSB/EiJ	MGP_WSBEiJ_G0014483	pseudogene	ChrX:164253012-164253411 (-)

Homology

• Gene Tree
  Gm15233
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081500 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081500	Ensembl Gene Model | MGI Sequence Detail	400	C57BL/6J
transcript	ENSMUST00000118747	Ensembl | MGI Sequence Detail	400	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;