Gm15019 Pseudogene Detail

Summary

• Symbol
  Gm15019
• Name
  predicted gene 15019

• Feature Type
  pseudogene
• IDs
  MGI:3705840
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:134627747-134630223 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 57.26 cM

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705840	pseudogene	ChrX:134627747-134630223 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040707	pseudogene	ChrX:133071986-133074462 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0040631	pseudogene	ChrX:136707494-136709983 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0040331	pseudogene	ChrX:133050086-133052326 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041401	pseudogene	ChrX:136862619-136866467 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0040302	pseudogene	ChrX:141074584-141078363 (+)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0040554	pseudogene	ChrX:133989205-133991681 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15019
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm15019
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  9

• Ensembl
  ENSMUSG00000084330 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084330	Ensembl Gene Model | MGI Sequence Detail	2477	C57BL/6J
transcript	ENSMUST00000120148	Ensembl | MGI Sequence Detail	434	Not Applicable

References

• Summaries
  All 5

  Diseases 1

  Phenotypes 2
• Earliest
  J:199138 Zhou J, et al., A 1.1-Mb segmental deletion on the X chromosome causes meiotic failure in male mice. Biol Reprod. 2013 Jun;88(6):159
• Latest
  J:210663 Zhou J, et al., Respiratory failure, cleft palate and epilepsy in the mouse model of human Xq22.1 deletion syndrome. Hum Mol Genet. 2014 Jul 15;23(14):3823-9