Gm15402 MGI Mouse Gene Detail - MGI:3707435

Sequence Map

Chr6:72676197-72682073 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3707435	lncRNA gene	Chr6:72676197-72682073 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004290	antisense lncRNA gene	Chr6:73279664-73285540 (+)
A/J	MGP_AJ_G0004268	antisense lncRNA gene	Chr6:70430521-70436397 (+)
AKR/J	MGP_AKRJ_G0004249	antisense lncRNA gene	Chr6:72512227-72518103 (+)
BALB/cJ	MGP_BALBcJ_G0004255	antisense lncRNA gene	Chr6:70455459-70461335 (+)
C3H/HeJ	MGP_C3HHeJ_G0004250	antisense lncRNA gene	Chr6:111731936-111737842 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004404	antisense lncRNA gene	Chr6:75185627-75191503 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003877	antisense lncRNA gene	Chr6:69565848-69571423 (+)
CAST/EiJ	MGP_CASTEiJ_G0004165	antisense lncRNA gene	Chr6:72375293-72381172 (+)
CBA/J	MGP_CBAJ_G0004197	antisense lncRNA gene	Chr6:78270355-78278965 (+)
DBA/2J	MGP_DBA2J_G0004213	antisense lncRNA gene	Chr6:69818047-69823953 (+)
FVB/NJ	MGP_FVBNJ_G0004228	antisense lncRNA gene	Chr6:69213620-69219496 (+)
LP/J	MGP_LPJ_G0004291	antisense lncRNA gene	Chr6:73179500-73185376 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004219	antisense lncRNA gene	Chr6:81638000-81643881 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004401	antisense lncRNA gene	Chr6:72336811-72342687 (+)
PWK/PhJ	MGP_PWKPhJ_G0004118	antisense lncRNA gene	Chr6:68741502-68747385 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004062	antisense lncRNA gene	Chr6:71070667-71076726 (+)
WSB/EiJ	MGP_WSBEiJ_G0004201	antisense lncRNA gene	Chr6:72707451-72713335 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000079524	Ensembl Gene Model \| MGI Sequence Detail	5877	C57BL/6J	± kb
	transcript	ENSMUST00000114051	Ensembl \| MGI Sequence Detail	670	Not Applicable

Summaries

All 10

Phenotypes 6
Earliest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Latest

J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)

TSS for Gm15402:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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