Gm15372 Pseudogene Detail

Summary

• Symbol
  Gm15372
• Name
  predicted gene 15372

• Feature Type
  pseudogene
• IDs
  MGI:3707469
  NCBI Gene: 100418105
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:88054498-88055331 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 44.52 cM

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3707469	pseudogene	Chr1:88054440-88055332 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0039902	pseudogene	Chr1:86238841-86239674 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0040450	pseudogene	Chr1:92868464-92869297 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038643	pseudogene	Chr1:88266946-88267789 (+)
CBA/J	MGP_CBAJ_G0039492	pseudogene	Chr1:95885958-95886791 (+)
DBA/2J	MGP_DBA2J_G0039698	pseudogene	Chr1:85497156-85497999 (+)
FVB/NJ	MGP_FVBNJ_G0039658	pseudogene	Chr1:84569458-84570291 (+)
LP/J	MGP_LPJ_G0039731	pseudogene	Chr1:90559551-90560384 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0040544	pseudogene	Chr1:88841837-88842670 (+)
PWK/PhJ	MGP_PWKPhJ_G0038323	pseudogene	Chr1:84845835-84846642 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038057	pseudogene	Chr1:87787931-87788774 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15372
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15372
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000084195 (Evidence)
• NCBI Gene
  100418105

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084195	Ensembl Gene Model | MGI Sequence Detail	834	C57BL/6J
transcript	ENSMUST00000120729	Ensembl | MGI Sequence Detail	834	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45