Gm15294 Pseudogene Detail

Summary

• Symbol
  Gm15294
• Name
  predicted gene 15294
• Synonyms
  EG666488

• Feature Type
  pseudogene
• IDs
  MGI:3708114
  NCBI Gene: 666488
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:140656405-140658231 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 62.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708114	pseudogene	ChrX:140656204-140658248 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0036146	protein coding gene	ChrX:139365295-139367156 (-)
A/J	MGP_AJ_G0036123	protein coding gene	ChrX:138762383-138764187 (-)
AKR/J	MGP_AKRJ_G0036049	protein coding gene	ChrX:143177563-143179367 (-)
BALB/cJ	MGP_BALBcJ_G0036114	protein coding gene	ChrX:137007627-137008983 (-)
C3H/HeJ	MGP_C3HHeJ_G0035822	protein coding gene	ChrX:139484534-139486306 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0036637	protein coding gene	ChrX:143383002-143384774 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0033461	protein coding gene	ChrX:130376516-130378372 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0035799	protein coding gene	ChrX:147846322-147848116 (-)
DBA/2J	MGP_DBA2J_G0035957	protein coding gene	ChrX:137831199-137833743 (-)
FVB/NJ	MGP_FVBNJ_G0035891	protein coding gene	ChrX:137061754-137063796 (-)
LP/J	MGP_LPJ_G0036048	protein coding gene	ChrX:140309880-140311683 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0035927	protein coding gene	ChrX:155443120-155444919 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0036674	protein coding gene	ChrX:138679125-138680923 (-)
PWK/PhJ	MGP_PWKPhJ_G0034807	protein coding gene	ChrX:117036972-117039323 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0034632	protein coding gene	ChrX:120717115-120722554 (-)
WSB/EiJ	MGP_WSBEiJ_G0035248	protein coding gene	ChrX:137089052-137090674 (-)

Homology

• MGI Vertebrate Homology
  Gm15294 stringent orthology
  1 mouse;1 zebrafish
  
• Gene Tree
  Gm15294
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000081607 (Evidence)
• NCBI Gene
  666488

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081607	Ensembl Gene Model | MGI Sequence Detail	1827	C57BL/6J
transcript	ENSMUST00000118177	Ensembl | MGI Sequence Detail	977	Not Applicable

Other
Accession IDs

MGI:3646868

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;