Gm15197 Pseudogene Detail

Summary

• Symbol
  Gm15197
• Name
  predicted gene 15197
• Synonyms
  EG666540

• Feature Type
  pseudogene
• IDs
  MGI:3708123
  NCBI Gene: 666540
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:42206782-42207259 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 22.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708123	pseudogene	Chr10:42206782-42207259 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010510	pseudogene	Chr10:41027728-41028205 (-)
A/J	MGP_AJ_G0010504	pseudogene	Chr10:39874997-39875474 (-)
AKR/J	MGP_AKRJ_G0010467	pseudogene	Chr10:40484829-40485306 (-)
BALB/cJ	MGP_BALBcJ_G0010477	pseudogene	Chr10:39942803-39943280 (-)
C3H/HeJ	MGP_C3HHeJ_G0010405	pseudogene	Chr10:40824414-40824891 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010748	pseudogene	Chr10:42269206-42269683 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009417	pseudogene	Chr10:37752202-37752680 (-)
CAST/EiJ	MGP_CASTEiJ_G0010222	pseudogene	Chr10:41016362-41016838 (-)
CBA/J	MGP_CBAJ_G0010371	pseudogene	Chr10:44207327-44207804 (-)
DBA/2J	MGP_DBA2J_G0010404	pseudogene	Chr10:39372645-39373122 (-)
FVB/NJ	MGP_FVBNJ_G0010423	pseudogene	Chr10:38867985-38868462 (-)
LP/J	MGP_LPJ_G0010493	pseudogene	Chr10:41032058-41032535 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010390	pseudogene	Chr10:44966656-44967133 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010716	pseudogene	Chr10:40453526-40454003 (-)
PWK/PhJ	MGP_PWKPhJ_G0010124	pseudogene	Chr10:39247403-39247879 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009938	pseudogene	Chr10:40274942-40275417 (-)
WSB/EiJ	MGP_WSBEiJ_G0010291	pseudogene	Chr10:40766685-40767162 (-)

Homology

• Gene Tree
  Gm15197
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15197
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081873 (Evidence)
• NCBI Gene
  666540

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081873	Ensembl Gene Model | MGI Sequence Detail	478	C57BL/6J
transcript	ENSMUST00000120526	Ensembl | MGI Sequence Detail	478	Not Applicable

Other
Accession IDs

MGI:3644581

References

• Summaries
  All 12

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87