Gm10193 Pseudogene Detail

Summary

• Symbol
  Gm10193
• Name
  predicted gene 10193

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3708520
  NCBI Gene: 100042023
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:105692169-105692399 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 49.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708520	pseudogene	Chr1:105692004-105692442 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010274	pseudogene	Chr1:107884976-107885205 (+)
A/J	MGP_AJ_G0010268	pseudogene	Chr1:104124120-104124349 (+)
AKR/J	MGP_AKRJ_G0010238	pseudogene	Chr1:106978245-106978474 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0010515	pseudogene	Chr1:112031453-112031683 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0010182	pseudogene	Chr1:103190461-103192286 (+)
FVB/NJ	MGP_FVBNJ_G0010201	pseudogene	Chr1:102131999-102133977 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0010160	pseudogene	Chr1:120303872-120304101 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010480	pseudogene	Chr1:107056442-107058996 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm10193
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm10193
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  2

• Ensembl
  ENSMUSG00000101330 (Evidence)
• NCBI Gene
  100042023

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101330	Ensembl Gene Model | MGI Sequence Detail	231	C57BL/6J
transcript	ENSMUST00000188288	Ensembl | MGI Sequence Detail	231	Not Applicable
polypeptide	XP_036011919	RefSeq | MGI Sequence Detail	76	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45