Gm10619 Gene Detail

Summary

• Symbol
  Gm10619
• Name
  predicted gene 10619

• Feature Type
  lncRNA gene
• IDs
  MGI:3708756
  NCBI Gene: 100579147
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:73457970-73466251 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 42.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  249 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708756	lncRNA gene	Chr7:73431177-73466251 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007212	lincRNA gene	Chr7:75365360-75401552 (-)
A/J	MGP_AJ_G0007209	lincRNA gene	Chr7:73659741-73694732 (-)
AKR/J	MGP_AKRJ_G0007179	lincRNA gene	Chr7:75217003-75252397 (-)
BALB/cJ	MGP_BALBcJ_G0007187	lincRNA gene	Chr7:73408810-73443816 (-)
C3H/HeJ	MGP_C3HHeJ_G0007131	lincRNA gene	Chr7:75972760-76007711 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007357	lincRNA gene	Chr7:78466213-78503246 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006565	lincRNA gene	Chr7:76296237-76332435 (-)
CAST/EiJ	MGP_CASTEiJ_G0007033	lincRNA gene	Chr7:66809567-66847610 (-)
CBA/J	MGP_CBAJ_G0007114	lincRNA gene	Chr7:81028689-81068248 (-)
DBA/2J	MGP_DBA2J_G0007135	lincRNA gene	Chr7:72322890-72358736 (-)
FVB/NJ	MGP_FVBNJ_G0007158	lincRNA gene	Chr7:72374861-72409895 (-)
LP/J	MGP_LPJ_G0007217	lincRNA gene	Chr7:76583106-76619026 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007134	lincRNA gene	Chr7:81180015-81215005 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007360	lincRNA gene	Chr7:74678389-74714809 (-)
PWK/PhJ	MGP_PWKPhJ_G0006976	lincRNA gene	Chr7:65488240-65523746 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006884	lincRNA gene	Chr7:61760714-61796523 (-)
WSB/EiJ	MGP_WSBEiJ_G0007094	lincRNA gene	Chr7:75027939-75064496 (-)

Homology

• Gene Tree
  Gm10619
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm10619
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  78
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000074067 (Evidence)
• NCBI Gene
  100579147

Representative Sequences			Length	Strain/Species
genomic	100579147	NCBI Gene Model | MGI Sequence Detail	8282	C57BL/6J
transcript	NR_077222	RefSeq | MGI Sequence Detail	2696	ZRU/MplStud
polypeptide	Q3V0C4	UniProt | EBI | MGI Sequence Detail	149	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 19

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

TSS for Gm10619:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr72977	Chr7:73466210-73466228 (-)	32 bp
Tssr72976	Chr7:73466194-73466201 (-)	53 bp