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Samt1d Gene Detail
Summary
  • Symbol
    Samt1d
  • Name
    spermatogenesis associated multipass transmembrane protein 1d
  • Synonyms
    Gm15140
  • Feature Type
    protein coding gene
  • IDs
    MGI:3709336
    NCBI Gene: 625713
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:152892629-152903681 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 72.38 cM
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3709336
 protein coding gene ChrX:152892629-152903681 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036201
 protein coding gene ChrX:151967878-151972716 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0036103
 protein coding gene ChrX:156263832-156267503 (+)
BALB/cJ MGP_BALBcJ_G0036169
 protein coding gene ChrX:149580385-149584286 (+)
C3H/HeJ MGP_C3HHeJ_G0035876
 protein coding gene ChrX:152521417-152525356 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0036011
 protein coding gene ChrX:150485998-150489685 (+)
FVB/NJ MGP_FVBNJ_G0035947
 protein coding gene ChrX:149619826-149623623 (+)
LP/J MGP_LPJ_G0036102
 protein coding gene ChrX:153326207-153336781 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0034863
 protein coding gene ChrX:128786433-128787306 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 625713 NCBI Gene Model | MGI Sequence Detail 11053 C57BL/6J ±  kb
transcript NM_001243017 RefSeq | MGI Sequence Detail 984 C57BL/6  
polypeptide NP_001229946 RefSeq | MGI Sequence Detail 237 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006187 Claudin
Other
Accession IDs
less
MGI:6331387
References
more
  • Summaries
    All 10
    Gene Ontology 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:161428 Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas, Annotation inferences using phylogenetic trees. 2010;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory