Gm14500 Pseudogene Detail

Summary

• Symbol
  Gm14500
• Name
  predicted gene 14500

• Feature Type
  pseudogene
• IDs
  MGI:3709640
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:8470659-8470771 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 3.90 cM

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3709640	pseudogene	ChrX:8470659-8470771 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040668	pseudogene	ChrX:3288874-3288965 (-)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0040295	pseudogene	ChrX:3402160-3402251 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0040473	pseudogene	ChrX:3520007-3520098 (-)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0040399	pseudogene	ChrX:3748869-3748981 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm14500
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  7

• Ensembl
  ENSMUSG00000080897 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080897	Ensembl Gene Model | MGI Sequence Detail	113	C57BL/6J
transcript	ENSMUST00000121647	Ensembl | MGI Sequence Detail	113	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;