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Plac9 Gene Detail
Summary
  • Symbol
    Plac9
  • Name
    placenta specific 9
  • Synonyms
    Gm10393, Gm9780, Plac9, Plac9a, Plac9b
  • Feature Type
    protein coding gene
  • IDs
    MGI:2663998
    NCBI Gene: 211623
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr14:25888356-25903339 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 15.41 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2663998
 protein coding gene Chr14:25887930-25903524 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021070
 protein coding gene Chr14:18831204-18846192 (-)
A/J MGP_AJ_G0021019
 protein coding gene Chr14:18364873-18380002 (-)
AKR/J MGP_AKRJ_G0020996
 protein coding gene Chr14:19006381-19023909 (-)
BALB/cJ MGP_BALBcJ_G0021022
 protein coding gene Chr14:18463546-18478531 (-)
C3H/HeJ MGP_C3HHeJ_G0020806
 protein coding gene Chr14:18936063-18953319 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021455
 protein coding gene Chr14:19833453-19855514 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019024
 protein coding gene Chr14:18564556-18579648 (-)
CAST/EiJ MGP_CASTEiJ_G0020330
 protein coding gene Chr14:18833687-18848997 (-)
CBA/J MGP_CBAJ_G0020772
 protein coding gene Chr14:20351964-20367149 (-)
DBA/2J MGP_DBA2J_G0020895
 protein coding gene Chr14:18425918-18442781 (-)
FVB/NJ MGP_FVBNJ_G0020878
 protein coding gene Chr14:18044895-18060022 (-)
LP/J MGP_LPJ_G0020971
 protein coding gene Chr14:19103170-19106285 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020904
 protein coding gene Chr14:20041825-20056825 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021488
 protein coding gene Chr14:18822173-18841743 (-)
PWK/PhJ MGP_PWKPhJ_G0020079
 protein coding gene Chr14:17790992-17807121 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019901
 protein coding gene Chr14:18635484-18654580 (-)
WSB/EiJ MGP_WSBEiJ_G0020386
 protein coding gene Chr14:18801590-18816671 (-)



Homology
more
  • Human Ortholog
    PLAC9, placenta associated 9
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PLAC9, placenta associated 9
  • Links
    NCBI Gene ID: 219348
    neXtProt AC: NX_Q5JTB6
    UniProt: Q5JTB6

  • Chr Location
    10q22.3; chr10:80131661-80145359 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    812
  • Tissues
    36
  • cDNA Data
    14
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 211623 NCBI Gene Model | MGI Sequence Detail 14984 C57BL/6J ±  kb
    transcript NM_207229 RefSeq | MGI Sequence Detail 944 C57BL/6  
    polypeptide Q8K262 UniProt | EBI | MGI Sequence Detail 108 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 15
      cDNA 14
      Other 1

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:3710532, MGI:3711222, MGI:6729945
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 4
      Gene Ontology 1
      Phenotypes 11
    • Earliest
      J:83692 Galaviz-Hernandez C, et al., Plac8 and Plac9, novel placental-enriched genes identified through microarray analysis. Gene. 2003 May 8;309(2):81-9
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory