Gm14455 Gene Detail

Summary

• Symbol
  Gm14455
• Name
  predicted gene 14455

• Feature Type
  lncRNA gene
• IDs
  MGI:3711286
  NCBI Gene: 118568483
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:172267722-172282467 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 94.86 cM

Strain
Comparison

• SNPs within 2kb
  600 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3711286	lncRNA gene	Chr2:172267722-172282480 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015494	unclassified non-coding RNA gene	Chr2:178598139-178612914 (-)
A/J	MGP_AJ_G0015471	unclassified non-coding RNA gene	Chr2:171120772-171135510 (-)
AKR/J	MGP_AKRJ_G0015435	unclassified non-coding RNA gene	Chr2:176286676-176303836 (-)
BALB/cJ	MGP_BALBcJ_G0015434	unclassified non-coding RNA gene	Chr2:171510398-171526612 (-)
C3H/HeJ	MGP_C3HHeJ_G0015257	unclassified non-coding RNA gene	Chr2:176637508-176654677 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015888	unclassified non-coding RNA gene	Chr2:183765409-183780220 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013626	unclassified non-coding RNA gene	Chr2:164368640-164383745 (-)
CAST/EiJ	MGP_CASTEiJ_G0014809	unclassified non-coding RNA gene	Chr2:177310790-177325354 (-)
CBA/J	MGP_CBAJ_G0015238	unclassified non-coding RNA gene	Chr2:190622513-190638905 (-)
DBA/2J	MGP_DBA2J_G0015332	unclassified non-coding RNA gene	Chr2:170215472-170230192 (-)
FVB/NJ	MGP_FVBNJ_G0015339	unclassified non-coding RNA gene	Chr2:168816889-168831894 (-)
LP/J	MGP_LPJ_G0015410	unclassified non-coding RNA gene	Chr2:178530067-178544863 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015363	unclassified non-coding RNA gene	Chr2:193609921-193627853 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015928	unclassified non-coding RNA gene	Chr2:176255358-176272013 (-)
PWK/PhJ	MGP_PWKPhJ_G0014597	unclassified non-coding RNA gene	Chr2:169974666-169989601 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014385	unclassified non-coding RNA gene	Chr2:175248945-175270182 (-)
WSB/EiJ	MGP_WSBEiJ_G0014916	unclassified non-coding RNA gene	Chr2:177227977-177245411 (-)

Homology

• Gene Tree
  Gm14455
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000087633 (Evidence)
• NCBI Gene
  118568483

Representative Sequences			Length	Strain/Species
genomic	118568483	NCBI Gene Model | MGI Sequence Detail	14746	C57BL/6J
transcript	AK047799	GenBank | ENA | DDBJ | MGI Sequence Detail	2137	C57BL/6J
polypeptide	Q8BQM2	UniProt | EBI | MGI Sequence Detail	215	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 11

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm14455:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr27946	Chr2:172282436-172282449 (-)	24 bp