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Cyp4a29 Gene Detail
Summary
  • Symbol
    Cyp4a29
  • Name
    cytochrome P450, family 4, subfamily a, polypeptide 29
  • Synonyms
    Cyp4a29-ps
  • Feature Type
    protein coding gene
  • IDs
    MGI:3717143
    NCBI Gene: 230639
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:115099281-115111754 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 52.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    455 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3717143
 protein coding gene Chr4:115099241-115112138 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028597
 protein coding gene Chr4:116013200-116025596 (+)
A/J MGP_AJ_G0028559
 protein coding gene Chr4:111587759-111600666 (+)
AKR/J MGP_AKRJ_G0028507
 protein coding gene Chr4:113912252-113932040 (+)
BALB/cJ MGP_BALBcJ_G0028579
 protein coding gene Chr4:112131050-112147066 (-)
C3H/HeJ MGP_C3HHeJ_G0028293
 protein coding gene Chr4:115430296-115437979 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0026307
 protein coding gene Chr4:105689119-105700871 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0028410
 protein coding gene Chr4:112132531-112155177 (-)
FVB/NJ MGP_FVBNJ_G0028378
 protein coding gene Chr4:110718627-110730672 (+)
LP/J MGP_LPJ_G0028511
 protein coding gene Chr4:116210017-116221121 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028403
 protein coding gene Chr4:128789774-128805546 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029059
 protein coding gene Chr4:115158135-115171515 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0027279
 protein coding gene Chr4:111456101-111469327 (-)
WSB/EiJ MGP_WSBEiJ_G0027808
 protein coding gene Chr4:114826192-114847565 (-)



Homology
more
  • Human Ortholog
    CYP4A11, cytochrome P450 family 4 subfamily A member 11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CYP4A11, cytochrome P450 family 4 subfamily A member 11
  • Synonyms
    CP4Y, CYP4A2, CYP4AII, CYPIVA11
  • Links
    NCBI Gene ID: 1579
    neXtProt AC: NX_Q02928
    UniProt: Q02928

  • Chr Location
    1p33; chr1:46929177-46941484 (-)  GRCh38
  • Human Ortholog
    CYP4A22, cytochrome P450 family 4 subfamily A member 22
  • Links
    NCBI Gene ID: 284541
    neXtProt AC: NX_Q5TCH4
    UniProt: Q5TCH4

  • Chr Location
    1p33; chr1:47137435-47149727 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human CYP4A11 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083138 Ensembl Gene Model | MGI Sequence Detail 12474 C57BL/6J ±  kb
transcript ENSMUST00000118278 Ensembl | MGI Sequence Detail 1530 Not Applicable  
polypeptide ENSMUSP00000139717 Ensembl | MGI Sequence Detail 509 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR001128 Cytochrome P450
    IPR002401 Cytochrome P450, E-class, group I
    IPR050196 Cytochrome P450 Monooxygenases
    IPR036396 Cytochrome P450 superfamily
Other
Accession IDs
less
MGI:3651922
References
more
  • Summaries
    All 16
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory