Vmn2r-ps13 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps13
• Name
  vomeronasal 2, receptor, pseudogene 13

• Feature Type
  pseudogene
• IDs
  MGI:3757946
  NCBI Gene: 670110
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:64806273-64807180 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 30.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3757946	pseudogene	Chr3:64806273-64807280 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040281	pseudogene	Chr3:62146699-62147274 (+)
AKR/J	MGP_AKRJ_G0040219	pseudogene	Chr3:63431741-63432316 (+)
BALB/cJ	MGP_BALBcJ_G0040283	pseudogene	Chr3:61981955-61982530 (+)
C3H/HeJ	MGP_C3HHeJ_G0039914	pseudogene	Chr3:63717712-63718287 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040870	pseudogene	Chr3:66406360-66406965 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038995	pseudogene	Chr3:63648606-63649181 (+)
CBA/J	MGP_CBAJ_G0039881	pseudogene	Chr3:68507159-68507734 (+)
DBA/2J	MGP_DBA2J_G0040079	pseudogene	Chr3:61648733-61649308 (+)
FVB/NJ	MGP_FVBNJ_G0040034	pseudogene	Chr3:60316361-60316936 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0040030	pseudogene	Chr3:73069443-73070018 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040976	pseudogene	Chr3:63335747-63336352 (+)
PWK/PhJ	MGP_PWKPhJ_G0038689	pseudogene	Chr3:61397287-61397862 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038387	pseudogene	Chr3:62525996-62526570 (+)
WSB/EiJ	MGP_WSBEiJ_G0039221	pseudogene	Chr3:63465782-63466357 (+)

Homology

• Gene Tree
  Vmn2r-ps13
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Vmn2r-ps13
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000093767 (Evidence)
• NCBI Gene
  670110

Representative Sequences			Length	Strain/Species
genomic	670110	NCBI Gene Model | MGI Sequence Detail	908	C57BL/6J

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426