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Vmn2r13 Gene Detail
Summary
  • Symbol
    Vmn2r13
  • Name
    vomeronasal 2, receptor 13
  • Synonyms
    Gm4867
  • Feature Type
    protein coding gene
  • IDs
    MGI:3761379
    NCBI Gene: 231589
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:109303889-109339973 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 53.24 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    948 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3761379
 protein coding gene Chr5:109300806-109340065 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029870
 protein coding gene Chr5:111381223-111399862 (-)
A/J MGP_AJ_G0029835
 protein coding gene Chr5:107089749-107125574 (-)
AKR/J MGP_AKRJ_G0029777
 protein coding gene Chr5:110533721-110578986 (-)
BALB/cJ MGP_BALBcJ_G0029847
 protein coding gene Chr5:108284469-108308994 (-)
C3H/HeJ MGP_C3HHeJ_G0029570
 protein coding gene Chr5:110981629-111007395 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030299
 protein coding gene Chr5:115879882-115904903 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0029537
 protein coding gene Chr5:119909220-119942045 (-)
DBA/2J MGP_DBA2J_G0029686
 protein coding gene Chr5:107167046-107227321 (-)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0030336
 protein coding gene Chr5:109977397-110070085 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 231589 NCBI Gene Model | MGI Sequence Detail 36085 C57BL/6J ±  kb
transcript NM_001384974 RefSeq | MGI Sequence Detail 2538 C57BL/6  
polypeptide NP_001098094 RefSeq | MGI Sequence Detail 831 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR000337 GPCR, family 3
    IPR017978 GPCR family 3, C-terminal
    IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
    IPR011500 GPCR, family 3, nine cysteines domain
    IPR038550 GPCR, family 3, nine cysteines domain superfamily
    IPR004073 GPCR, family 3, vomeronasal receptor, type 2
    IPR028082 Periplasmic binding protein-like I
    IPR001828 Receptor, ligand binding region
Other
Accession IDs
less
MGI:3646081
References
more
  • Summaries
    All 14
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory