Vmn2r-ps143 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps143
• Name
  vomeronasal 2, receptor, pseudogene 143

• Feature Type
  pseudogene
• IDs
  MGI:3761705
  NCBI Gene: 100040695
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrY:35287762-35288397 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome Y, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761705	pseudogene	ChrY:35287762-35288397 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Vmn2r-ps143
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  100040695

Representative Sequences			Length	Strain/Species
genomic	100040695	NCBI Gene Model | MGI Sequence Detail	636	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5
• Latest
  J:250379 Fischer M, et al., Large deletion on the Y-chromosome long arm (Yq) of C57BL/6JBomTac inbred mice. Mamm Genome. 2017 Feb;28(1-2):31-37