Gm15452 Pseudogene Detail

Summary

• Symbol
  Gm15452
• Name
  predicted gene 15452

• Feature Type
  pseudogene
• IDs
  MGI:3768636
  NCBI Gene: 100039474
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:8862147-8862386 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 2.08 cM

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  6

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3768636	pseudogene	Chr1:8861885-8862453 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0011189	pseudogene	Chr15:73434336-73434575 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010880	pseudogene	Chr15:76272110-76272349 (+)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0011175	pseudogene	Chr15:76298122-76298361 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0012256	pseudogene	Chr4:116362964-116363204 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012065	pseudogene	Chr4:118882728-118882967 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15452
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  1

• Ensembl
  ENSMUSG00000084353 (Evidence)
• NCBI Gene
  100039474

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084353	Ensembl Gene Model | MGI Sequence Detail	240	C57BL/6J
transcript	ENSMUST00000119877	Ensembl | MGI Sequence Detail	240	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;