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Gm4872 Gene Detail
Summary
  • Symbol
    Gm4872
  • Name
    predicted gene 4872
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3779443
    NCBI Gene: 231989
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:53198149-53201960 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    271 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3779443
 lncRNA gene Chr6:53198149-53203584 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006967
 lincRNA gene Chr6:52532213-52536911 (+)
A/J MGP_AJ_G0006962
 lincRNA gene Chr6:50076984-50080789 (+)
AKR/J MGP_AKRJ_G0006932
 lincRNA gene Chr6:51803099-51806907 (+)
BALB/cJ MGP_BALBcJ_G0006939
 lincRNA gene Chr6:50425795-50429625 (+)
C3H/HeJ MGP_C3HHeJ_G0006883
 lincRNA gene Chr6:51814344-51819528 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007101
 lincRNA gene Chr6:53689943-53695827 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006348
 lincRNA gene Chr6:47710717-47714554 (+)
CAST/EiJ MGP_CASTEiJ_G0006799
 lincRNA gene Chr6:51638822-51642634 (+)
CBA/J MGP_CBAJ_G0006865
 lincRNA gene Chr6:55918459-55922183 (+)
DBA/2J MGP_DBA2J_G0006885
 lincRNA gene Chr6:49986516-49990863 (+)
FVB/NJ MGP_FVBNJ_G0006908
 lincRNA gene Chr6:49588322-49592189 (+)
LP/J MGP_LPJ_G0006967
 lincRNA gene Chr6:52473374-52478776 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006888
 lincRNA gene Chr6:58513112-58518313 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007105
 lincRNA gene Chr6:51736766-51741227 (+)
PWK/PhJ MGP_PWKPhJ_G0006739
 lincRNA gene Chr6:49611035-49615417 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006649
 lincRNA gene Chr6:51091689-51095508 (+)
WSB/EiJ MGP_WSBEiJ_G0006854
 lincRNA gene Chr6:51755587-51759428 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107935 Ensembl Gene Model | MGI Sequence Detail 3812 C57BL/6J ±  kb
transcript ENSMUST00000205210 Ensembl | MGI Sequence Detail 1299 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 8
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory