Gm5281 Pseudogene Detail

Summary

• Symbol
  Gm5281
• Name
  predicted gene 5281

• Feature Type
  pseudogene
• IDs
  MGI:3779483
  NCBI Gene: 383923
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:135755316-135757449 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 63.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  251 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779483	pseudogene	Chr3:135754931-135757492 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012434	pseudogene	Chr3:138977187-138979320 (-)
A/J	MGP_AJ_G0012429	pseudogene	Chr3:134101762-134103895 (-)
AKR/J	MGP_AKRJ_G0012394	pseudogene	Chr3:137650183-137652316 (-)
BALB/cJ	MGP_BALBcJ_G0012411	pseudogene	Chr3:133927063-133929196 (-)
C3H/HeJ	MGP_C3HHeJ_G0012275	pseudogene	Chr3:137980644-137982777 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012725	pseudogene	Chr3:143822145-143824278 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011082	pseudogene	Chr3:129291686-129293583 (-)
CAST/EiJ	MGP_CASTEiJ_G0012041	pseudogene	Chr3:137736680-137738810 (-)
CBA/J	MGP_CBAJ_G0012253	pseudogene	Chr3:148689100-148691233 (-)
DBA/2J	MGP_DBA2J_G0012308	pseudogene	Chr3:133239491-133241624 (-)
FVB/NJ	MGP_FVBNJ_G0012310	pseudogene	Chr3:130724714-130726847 (-)
LP/J	MGP_LPJ_G0012386	pseudogene	Chr3:140400929-140403062 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012317	pseudogene	Chr3:156811653-156813786 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012727	pseudogene	Chr3:137180116-137182249 (-)
PWK/PhJ	MGP_PWKPhJ_G0011880	pseudogene	Chr3:132958513-132960637 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011698	pseudogene	Chr3:135250483-135252602 (-)
WSB/EiJ	MGP_WSBEiJ_G0012068	pseudogene	Chr3:137984878-137987011 (-)

Homology

• Gene Tree
  Gm5281
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm5281
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105244 (Evidence)
• NCBI Gene
  383923

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105244	Ensembl Gene Model | MGI Sequence Detail	2134	C57BL/6J
transcript	ENSMUST00000197542	Ensembl | MGI Sequence Detail	2134	Not Applicable

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 6
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426