Gm7104 Pseudogene Detail

Summary

• Symbol
  Gm7104
• Name
  predicted gene 7104

• Feature Type
  pseudogene
• IDs
  MGI:3779672
  NCBI Gene: 633093
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:88251308-88253839 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 42.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779672	pseudogene	Chr12:88249637-88253840 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0019948	protein coding gene	Chr12:85467246-85468093 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0019932	protein coding gene	Chr12:86296235-86298272 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0020383	protein coding gene	Chr12:91923007-91928907 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015589	protein coding gene	Chr10:74538146-74542579 (-)
CAST/EiJ	MGP_CASTEiJ_G0015564	protein coding gene	Chr1:80193399-80194976 (+)
CBA/J	MGP_CBAJ_G0019708	protein coding gene	Chr12:95384875-95385631 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0019805	protein coding gene	Chr12:83903540-83906044 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0019846	protein coding gene	Chr12:97598661-97600627 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0016407	protein coding gene	Chr10:79418488-79423373 (-)
WSB/EiJ	MGP_WSBEiJ_G0019336	protein coding gene	Chr12:88549148-88550575 (-)

Homology

• Gene Tree
  Gm7104
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm7104
• Incidental Mutations
  APF
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000094635 (Evidence)
• NCBI Gene
  633093

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094635	Ensembl Gene Model | MGI Sequence Detail	2532	C57BL/6J
transcript	ENSMUST00000179741	Ensembl | MGI Sequence Detail	2532	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;