Spin3-ps Pseudogene Detail

Summary

• Symbol
  Spin3-ps
• Name
  spindlin family, member 3, pseudogene
• Synonyms
  Spin3

• Feature Type
  pseudogene
• IDs
  MGI:3780056
  NCBI Gene: 675593
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:22579402-22580171 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 7.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  195 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780056	pseudogene	Chr3:22579169-22580407 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012067	pseudogene	Chr3:19777534-19778303 (+)
A/J	MGP_AJ_G0012058	pseudogene	Chr3:19675630-19676399 (+)
AKR/J	MGP_AKRJ_G0012020	pseudogene	Chr3:19908244-19909013 (+)
BALB/cJ	MGP_BALBcJ_G0012035	pseudogene	Chr3:19360092-19360861 (+)
C3H/HeJ	MGP_C3HHeJ_G0011913	pseudogene	Chr3:19886426-19887195 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012341	pseudogene	Chr3:20912040-20912809 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010775	pseudogene	Chr3:18150748-18151528 (+)
CAST/EiJ	MGP_CASTEiJ_G0011696	pseudogene	Chr3:19733848-19739695 (+)
CBA/J	MGP_CBAJ_G0011886	pseudogene	Chr3:21482818-21483587 (+)
DBA/2J	MGP_DBA2J_G0011939	pseudogene	Chr3:19248183-19248952 (+)
FVB/NJ	MGP_FVBNJ_G0011948	pseudogene	Chr3:18818345-18819114 (+)
LP/J	MGP_LPJ_G0012015	pseudogene	Chr3:20392233-20393567 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011950	pseudogene	Chr3:23535098-23535867 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012350	pseudogene	Chr3:19591435-19592204 (+)
PWK/PhJ	MGP_PWKPhJ_G0011541	pseudogene	Chr3:18870131-18870842 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011357	pseudogene	Chr3:19283125-19283911 (+)
WSB/EiJ	MGP_WSBEiJ_G0011719	pseudogene	Chr3:19610884-19611653 (+)

Homology

• Gene Tree
  Spin3-ps
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Spin3-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000103801 (Evidence)
• NCBI Gene
  675593

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103801	Ensembl Gene Model | MGI Sequence Detail	770	C57BL/6J
transcript	ENSMUST00000192825	Ensembl | MGI Sequence Detail	770	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426