Gm9678 Pseudogene Detail

Summary

• Symbol
  Gm9678
• Name
  predicted gene 9678

• Feature Type
  pseudogene
• IDs
  MGI:3780086
  NCBI Gene: 676433
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:98488469-98495606 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 42.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780086	pseudogene	Chr3:98488469-98495606 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040331	pseudogene	Chr3:99624710-99631875 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0040903	pseudogene	Chr3:103280994-103295949 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0040061	pseudogene	Chr3:93692306-93700702 (-)
LP/J	MGP_LPJ_G0040151	pseudogene	Chr3:100927096-100948305 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041401	pseudogene	Chr9:93214061-93222678 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039250	pseudogene	Chr3:98961666-98969317 (-)

Homology

• Gene Tree
  Gm9678
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9678
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  11
• RefSeq
  1

• Ensembl
  ENSMUSG00000106456 (Evidence)
• NCBI Gene
  676433

Representative Sequences			Length	Strain/Species
genomic	676433	NCBI Gene Model | MGI Sequence Detail	7138	C57BL/6J

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426