Gm2622 Pseudogene Detail

Summary

• Symbol
  Gm2622
• Name
  predicted gene 2622

• Feature Type
  pseudogene
• IDs
  MGI:3780790
  NCBI Gene: 100040139
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:56735738-56736208 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 27.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780790	pseudogene	Chr3:56735738-56736262 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012154	pseudogene	Chr3:55603603-55604073 (-)
A/J	MGP_AJ_G0012148	pseudogene	Chr3:53833621-53834091 (-)
AKR/J	MGP_AKRJ_G0012112	pseudogene	Chr3:54979230-54979699 (-)
BALB/cJ	MGP_BALBcJ_G0012126	pseudogene	Chr3:53732390-53732860 (-)
C3H/HeJ	MGP_C3HHeJ_G0012002	pseudogene	Chr3:55198600-55199070 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012436	pseudogene	Chr3:57662557-57663027 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010858	pseudogene	Chr3:50331145-50331614 (-)
CAST/EiJ	MGP_CASTEiJ_G0011781	pseudogene	Chr3:55344354-55344824 (-)
CBA/J	MGP_CBAJ_G0011977	pseudogene	Chr3:59574380-59574850 (-)
DBA/2J	MGP_DBA2J_G0012033	pseudogene	Chr3:53409517-53409986 (-)
FVB/NJ	MGP_FVBNJ_G0012036	pseudogene	Chr3:52388833-52389302 (-)
LP/J	MGP_LPJ_G0012100	pseudogene	Chr3:56316304-56316774 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012040	pseudogene	Chr3:63671927-63672396 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012444	pseudogene	Chr3:54911880-54912350 (-)
PWK/PhJ	MGP_PWKPhJ_G0011624	pseudogene	Chr3:53066675-53067144 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011440	pseudogene	Chr3:54639536-54640000 (-)
WSB/EiJ	MGP_WSBEiJ_G0011812	pseudogene	Chr3:55046639-55047108 (-)

Homology

• Gene Tree
  Gm2622
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm2622
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000105113 (Evidence)
• NCBI Gene
  100040139

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105113	Ensembl Gene Model | MGI Sequence Detail	471	C57BL/6J
transcript	ENSMUST00000200018	Ensembl | MGI Sequence Detail	471	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426