Gm3189 Pseudogene Detail

Summary

• Symbol
  Gm3189
• Name
  predicted gene 3189

• Feature Type
  pseudogene
• IDs
  MGI:3781368
  NCBI Gene: 100041186
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:3959239-3960070 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 2.28 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781368	pseudogene	Chr7:3959239-3960070 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013785	pseudogene	Chr7:893496-894327 (-)
A/J	MGP_AJ_G0013781	pseudogene	Chr7:849562-850393 (-)
AKR/J	MGP_AKRJ_G0013734	pseudogene	Chr7:918563-919394 (-)
BALB/cJ	MGP_BALBcJ_G0013763	pseudogene	Chr7:936480-937311 (-)
C3H/HeJ	MGP_C3HHeJ_G0013589	pseudogene	Chr7:916649-917480 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014156	pseudogene	Chr7:933099-933930 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012098	pseudogene	Chr7:661255-662086 (-)
CAST/EiJ	MGP_CASTEiJ_G0013273	pseudogene	Chr7:870349-871180 (-)
CBA/J	MGP_CBAJ_G0013566	pseudogene	Chr7:1087520-1088351 (-)
DBA/2J	MGP_DBA2J_G0013646	pseudogene	Chr7:857011-857842 (-)
FVB/NJ	MGP_FVBNJ_G0013646	pseudogene	Chr7:828434-829265 (-)
LP/J	MGP_LPJ_G0013730	pseudogene	Chr7:972932-973763 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013661	pseudogene	Chr7:963439-964270 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014137	pseudogene	Chr7:843882-844713 (-)
PWK/PhJ	MGP_PWKPhJ_G0013086	pseudogene	Chr7:1055543-1056374 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012864	pseudogene	Chr7:974520-975351 (-)
WSB/EiJ	MGP_WSBEiJ_G0013332	pseudogene	Chr7:879053-879884 (-)

Homology

• Gene Tree
  Gm3189
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108712 (Evidence)
• NCBI Gene
  100041186

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108712	Ensembl Gene Model | MGI Sequence Detail	832	C57BL/6J
transcript	ENSMUST00000205595	Ensembl | MGI Sequence Detail	832	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;