Gm3191 Pseudogene Detail

Summary

• Symbol
  Gm3191
• Name
  predicted gene 3191

• Feature Type
  pseudogene
• IDs
  MGI:3781370
  NCBI Gene: 100041191
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:106425409-106425754 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 56.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781370	pseudogene	Chr12:106425383-106425937 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010943	pseudogene	Chr12:108439065-108439410 (+)
A/J	MGP_AJ_G0010950	pseudogene	Chr12:104347048-104347393 (+)
AKR/J	MGP_AKRJ_G0010905	pseudogene	Chr12:107394065-107394410 (+)
BALB/cJ	MGP_BALBcJ_G0010923	pseudogene	Chr12:104773075-104773420 (+)
C3H/HeJ	MGP_C3HHeJ_G0010821	pseudogene	Chr12:107829000-107829345 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011195	pseudogene	Chr12:111777052-111777397 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009801	pseudogene	Chr12:100928095-100928434 (+)
CAST/EiJ	MGP_CASTEiJ_G0010652	pseudogene	Chr12:102658303-102658648 (+)
CBA/J	MGP_CBAJ_G0010794	pseudogene	Chr12:116218946-116219291 (+)
DBA/2J	MGP_DBA2J_G0010843	pseudogene	Chr12:103868620-103868965 (+)
FVB/NJ	MGP_FVBNJ_G0010856	pseudogene	Chr12:102658592-102658937 (+)
LP/J	MGP_LPJ_G0010926	pseudogene	Chr12:108298087-108298432 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010836	pseudogene	Chr12:119541822-119542167 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011181	pseudogene	Chr12:106805208-106805553 (+)
PWK/PhJ	MGP_PWKPhJ_G0010536	pseudogene	Chr12:98467349-98467694 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010354	pseudogene	Chr12:101016679-101017024 (+)
WSB/EiJ	MGP_WSBEiJ_G0010695	pseudogene	Chr12:107745527-107745872 (+)

Homology

• Gene Tree
  Gm3191
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3191
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000091762 (Evidence)
• NCBI Gene
  100041191

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091762	Ensembl Gene Model | MGI Sequence Detail	346	C57BL/6J
transcript	ENSMUST00000167139	Ensembl | MGI Sequence Detail	346	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;

TSS for Gm3191:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr114933	Chr12:106425393-106425416 (+)	-4 bp