Gm3329 Pseudogene Detail

Summary

• Symbol
  Gm3329
• Name
  predicted gene 3329

• Feature Type
  pseudogene
• IDs
  MGI:3781507
  NCBI Gene: 100041424
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:15920974-15921529 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 10.88 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781507	pseudogene	Chr19:15920974-15921529 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011476	pseudogene	Chr19:13643508-13644063 (+)
A/J	MGP_AJ_G0011477	pseudogene	Chr19:12852381-12852936 (+)
AKR/J	MGP_AKRJ_G0011442	pseudogene	Chr19:13393649-13394204 (+)
BALB/cJ	MGP_BALBcJ_G0011457	pseudogene	Chr19:12895441-12895996 (+)
C3H/HeJ	MGP_C3HHeJ_G0011343	pseudogene	Chr19:13333444-13333999 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011747	pseudogene	Chr19:14208085-14208640 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010294	pseudogene	Chr19:13317374-13317927 (+)
CAST/EiJ	MGP_CASTEiJ_G0011141	pseudogene	Chr19:12905152-12905707 (+)
CBA/J	MGP_CBAJ_G0011313	pseudogene	Chr19:14618250-14618805 (+)
DBA/2J	MGP_DBA2J_G0011369	pseudogene	Chr19:12900367-12900922 (+)
FVB/NJ	MGP_FVBNJ_G0011375	pseudogene	Chr19:12828608-12829163 (+)
LP/J	MGP_LPJ_G0011438	pseudogene	Chr19:13643017-13643572 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011371	pseudogene	Chr19:14585491-14586046 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011731	pseudogene	Chr19:13305979-13306534 (+)
PWK/PhJ	MGP_PWKPhJ_G0011000	pseudogene	Chr19:12434627-12435182 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010826	pseudogene	Chr19:12594675-12597607 (+)
WSB/EiJ	MGP_WSBEiJ_G0011172	pseudogene	Chr19:13326593-13327148 (+)

Homology

• Gene Tree
  Gm3329
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090147 (Evidence)
• NCBI Gene
  100041424

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090147	Ensembl Gene Model | MGI Sequence Detail	556	C57BL/6J
transcript	ENSMUST00000159873	Ensembl | MGI Sequence Detail	556	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;