Gm3355 Pseudogene Detail

Summary

• Symbol
  Gm3355
• Name
  predicted gene 3355

• Feature Type
  pseudogene
• IDs
  MGI:3781533
  NCBI Gene: 100041464
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:14082579-14083065 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 8.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  6

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781533	pseudogene	Chr17:14082579-14083065 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011327	pseudogene	Chr17:11633171-11633682 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0011285	pseudogene	Chr17:11212253-11212751 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0011577	pseudogene	Chr17:12163529-12173751 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0011201	pseudogene	Chr17:12194226-12195409 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011556	pseudogene	Chr17:11537492-11537977 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm3355
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8

• Ensembl
  ENSMUSG00000089883 (Evidence)
• NCBI Gene
  100041464

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089883	Ensembl Gene Model | MGI Sequence Detail	487	C57BL/6J
transcript	ENSMUST00000160079	Ensembl | MGI Sequence Detail	487	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;