Gm4252 Pseudogene Detail

Summary

• Symbol
  Gm4252
• Name
  predicted gene 4252

• Feature Type
  pseudogene
• IDs
  MGI:3782429
  NCBI Gene: 100043134
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:36559528-36559840 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 19.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782429	pseudogene	Chr17:36559506-36559866 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011349	pseudogene	Chr17:36601747-36602059 (-)
A/J	MGP_AJ_G0011339	pseudogene	Chr17:35397061-35397373 (-)
AKR/J	MGP_AKRJ_G0011304	pseudogene	Chr17:35811161-35811473 (-)
BALB/cJ	MGP_BALBcJ_G0011318	pseudogene	Chr17:35592224-35592536 (-)
C3H/HeJ	MGP_C3HHeJ_G0011204	pseudogene	Chr17:36316641-36316953 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011609	pseudogene	Chr17:38068542-38068854 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011020	pseudogene	Chr17:36350612-36350924 (-)
CBA/J	MGP_CBAJ_G0011185	pseudogene	Chr17:39632502-39632814 (-)
DBA/2J	MGP_DBA2J_G0011237	pseudogene	Chr17:34754972-34755284 (-)
FVB/NJ	MGP_FVBNJ_G0011237	pseudogene	Chr17:34456746-34457058 (-)
LP/J	MGP_LPJ_G0011315	pseudogene	Chr17:37012681-37012993 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011232	pseudogene	Chr17:38438490-38438802 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011586	pseudogene	Chr17:36119464-36119776 (-)
PWK/PhJ	MGP_PWKPhJ_G0010892	pseudogene	Chr17:33560962-33561274 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0011062	pseudogene	Chr17:36357441-36357753 (-)

Homology

• Gene Tree
  Gm4252
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm4252
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000092502 (Evidence)
• NCBI Gene
  100043134

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092502	Ensembl Gene Model | MGI Sequence Detail	313	C57BL/6J
transcript	ENSMUST00000174823	Ensembl | MGI Sequence Detail	313	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53